(corrected link) Post 7: Annotating the CMV ECOcluster TCRs with IEDB
(Sorry, my first attempt at this email got the post link wrong. Fixed below.)New CMVividly post!In Post 7, I intersect the CMV ECOcluster with IEDB to...
Post 7: Annotating the CMV ECOcluster TCRs with IEDB
New CMVividly post!In Post 7, I intersect the CMV ECOcluster with IEDB to annotate TCRs with peptide/species associations. Many TCRs appear to be cross-...
Post 6: Single CDR3 amino acid swaps
New CMVividly post!In Post 6, I look at pairs of CMV ECOcluster TCRs that have just one amino acid swap in their CDR3s. I show that CDR3 0-based position 4...
Post 5: Predicting CMV status and HLA type
New CMVividly post!In Post 5, I download some publicly available CMV-labeled repertoires and intersect the CMV ECOcluster with them. I use the CMV ECOcluster...